New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =334 (0.550)48 (0.079) 20/194 9.6 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998901 1182 (1.889)intergenic (+494/‑183) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0
Rejected: Position hash score below cutoff.

Only 100 of 134 total aligned reads displayed.

CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT....................................................................................................  <  NC_013198/1998866‑1998770
..............................................................................................ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  NC_013198/1998901‑1998802
                                                                                                                                                                                                     
CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAG                                                                                                  >  8:1184332/1‑101
CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAG                                                                                                  >  6:971239/1‑101
CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAG                                                                                                  >  21:971239/1‑101
CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAG                                                                                                  >  23:1184332/1‑101
                CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGT                                                                                  <  11:1199883/101‑1
                CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGT                                                                                  <  26:1199883/101‑1
                       ATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCG                                                                           >  16:911042/1‑101
                       ATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCG                                                                           >  1:911042/1‑101
                         AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  17:382821/1‑101
                           ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAG                                                                       >  4:81553/1‑101
                           ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAG                                                                       >  19:81553/1‑101
                                                TAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCAATAAGGATAACAGCC                                                  >  4:748808/1‑101
                                                TAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCAATAAGGATAACAGCC                                                  >  19:748808/1‑101
                                                 AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  26:1147745/1‑101
                                                 AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  11:1147745/1‑101
                                                        TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                          >  24:1116358/1‑101
                                                        TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                          >  3:890940/1‑101
                                                        TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                          >  4:55827/1‑101
                                                        TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                          >  19:55827/1‑101
                                                        TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                          >  18:890940/1‑101
                                                           TCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAA                                       >  25:114282/1‑101
                                                           TCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAA                                       >  10:114282/1‑101
                                                              AGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATAC                                    <  30:151448/101‑1
                                                              AGCAAATATGCTTGACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATAC                                    <  15:151448/101‑1
                                                                            ACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACT                      >  17:326091/1‑101
                                                                            ACATTACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACT                      >  2:326091/1‑101
                                                                                TACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCT                  >  9:847538/1‑101
                                                                                TACCAGCGGCTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCT                  >  24:847538/1‑101
                                                                                         CTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATT         >  19:23638/1‑101
                                                                                         CTGGCATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATT         >  4:23638/1‑101
                                                                                           GGCATTATAGTGTTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTAT       >  18:46272/1‑101
                                                                                           GGCATTATAGTGTTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTAT       >  3:46272/1‑101
                                                                                             gATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCG     >  7:34491/2‑101
                                                                                             gATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCG     >  22:34491/2‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTGGTTAGGAAGCCATAAGGAGACCAGCCAAATGAATAAATAAATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  21:627396/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTGGTTAGGAAGCCATAAGGAGACCAGCCAAATGAATAAATAAATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  6:627396/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTTTCTGCACTTGCTAACAGCATTATCGA    >  2:377827/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGTTAACAGCATTATCGA    >  11:663509/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGTTAACAGCATTATCGA    >  26:663509/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  28:1007411/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  2:1063092/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  13:1007411/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  25:453040/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  3:990729/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  2:616091/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  2:648371/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  11:932090/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  26:932090/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  4:151185/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  4:999260/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  5:604948/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  7:121889/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  10:453040/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  17:616091/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  17:648371/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  18:990729/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  19:151185/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  19:999260/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  20:604948/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  22:121889/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTCCTAACAGCATTATCGA    >  24:769458/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTCCTAACAGCATTATCGA    >  9:769458/1‑101
                                                                                              ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATAAATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  8:311555/1‑101
                                                                                              ATNATAGTGGGTAACATTNNNNTNGTGTCGTTAGTCAGCCATAAGGAGAACAGNCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  13:1112594/1‑101
                                                                                              ATNATAGTGGGTAACATTNNNNTNGTGTCGTTAGTCAGCCATAAGGAGAACAGNCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  28:1112594/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTTTGTCGTTAGTGAAGCAGAAGGAGAACAGCCAAGTGAATAAATAAATAGTGTCTGAACTTGCTAACAGAATTATAGAG   >  6:846072/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTTTGTCGTTAGTGAAGCAGAAGGAGAACAGCCAAGTGAATAAATAAATAGTGTCTGAACTTGCTAACAGAATTATAGAG   >  21:846072/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  10:859801/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  17:1120236/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  1:551245/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  16:551245/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  13:718865/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  12:977981/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  27:977981/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  13:547509/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  2:1120236/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  13:369740/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  25:859801/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  28:718865/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  28:547509/1‑101
                                                                                               TTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  28:369740/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  17:1101085/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  6:911593/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  26:579909/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  16:79016/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  26:434510/101‑1
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  8:192058/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  13:1235793/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  6:1124711/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  23:192058/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  5:464439/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  11:434510/101‑1
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  11:579909/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  14:1176347/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  1:79016/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  20:464439/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  21:1124711/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  21:911593/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  29:1176347/1‑101
                                                                                                TATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  28:1235793/1‑101
                                                                                                                                                                                                     
CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT....................................................................................................  <  NC_013198/1998866‑1998770
..............................................................................................ATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  NC_013198/1998901‑1998802

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG