New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =432 (0.573)28 (0.037) 12/192 10.3 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998886 2430 (3.093)intergenic (+479/‑198) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0
Rejected: Position hash score below cutoff.

Only 100 of 122 total aligned reads displayed.

GAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATT....................................................................................................  <  NC_013198/1998857‑1998770
....................................................................................C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  <  NC_013198/1998886‑1998787
                                                                                                                                                                                                
GAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTGGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGT                                                                                         >  8:697722/1‑101
GAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTGGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGT                                                                                         >  22:697722/1‑101
  ACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTA                                                                                       >  19:892925/1‑101
  ACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTA                                                                                       >  5:892925/1‑101
     GCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTC                                                                                    >  19:998132/1‑101
     GCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTC                                                                                    >  5:998132/1‑101
              ATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCTAACATTAGAGTTGTGTCGTTAGTCAGCCA                                                                               >  27:84033/1‑101
              ATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCTAACATTAGAGTTGTGTCGTTAGTCAGCCA                                                                               >  13:84033/1‑101
                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGCACAG                                                                   >  26:752279/1‑101
                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGCACAG                                                                   >  12:752279/1‑101
                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAG                                                                   >  1:864171/1‑101
                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAG                                                                   >  15:864171/1‑101
                        CGTGTCTGCACTTGCTAACAGCATTATCGAGCAACTATGCTTGACATTAGCGGGGGCTGGG....GTTTTAGTTGTGTCGTTAGCCAGCCACAGGGAGAAAAGCC                                                                 >  6:934095/1‑101
                            TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTTGTCAGCCATACGGAGAACAGACAAAT                                                             >  12:311620/1‑101
                            TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTTGTCAGCCATACGGAGAACAGACAAAT                                                             >  26:311620/1‑101
                             CTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....AT...AGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                                         >  6:52762/1‑101
                             CTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....AT...AGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                                         >  20:52762/1‑101
                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATAC                                                   >  11:683309/1‑101
                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATAC                                                   >  25:683309/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  4:1078119/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  20:82362/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  13:580850/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  1:943818/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  18:1078119/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  19:1225219/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  19:555987/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  27:580850/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  5:1225219/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  15:943818/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  5:555987/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  26:535656/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  12:535656/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  25:83838/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  11:83838/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  11:1074486/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  23:994897/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  10:243700/1‑101
                                                                                    C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  24:243700/1‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  17:136421/2‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  3:136421/2‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  3:31163/2‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  17:31163/2‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  15:765086/2‑101
                                                                                        aATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGA     >  12:951429/2‑101
                                                                                        aATTATAGTTGGGAAGTTAGGAAGGCATAAGGACAAAAACCAAACGAATAAATACAACGTGTCTGCACTTGCTAACAGCATTATCGAGACAAGATGCCTGA     >  26:406060/2‑101
                                                                                        aATTATAGTTGGGAAGTTAGGAAGGCATAAGGACAAAAACCAAACGAATAAATACAACGTGTCTGCACTTGCTAACAGCATTATCGAGACAAGATGCCTGA     >  12:406060/2‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTACCAGCATTATCGCGCAAATATGCTTGAC    >  27:1135023/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTACCAGCATTATCGCGCAAATATGCTTGAC    >  13:1135023/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCACATATACTTGAC    >  24:380607/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCACATATACTTGAC    >  10:380607/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  9:400838/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    <  2:57072/101‑1
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  24:737360/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  7:628099/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  6:196078/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  10:1158936/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  2:664709/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    <  16:57072/101‑1
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  16:664709/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  23:400838/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  21:628099/1‑101
                                                                                         ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  20:196078/1‑101
                                                                                         ATTATAGTTGTGTCATTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  22:1177178/1‑101
                                                                                         ATTATAGTTGTGTCATTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGAC    >  8:1177178/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACCGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  26:76720/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACCGCATTATCAAGCAAATATACTTGAC  >  5:772471/1‑100
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACCGCATTATCAAGCAAATATACTTGAC  >  19:772471/1‑100
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  13:641472/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  13:1066200/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  11:47700/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  7:942021/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  27:641472/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  1:340542/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  27:1066200/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  21:942021/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  9:637406/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  23:637406/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  25:47700/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  23:709004/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACA   >  9:709004/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAA.TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  19:679595/1‑101
                                                                                          TTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAA.TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  5:679595/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  10:580929/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  7:977933/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  10:1172678/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  12:221952/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  13:169009/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  19:252697/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  15:1164995/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  5:252697/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  3:818837/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  17:818837/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  24:1172678/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  1:1164995/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  27:169009/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  21:977933/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  26:221952/1‑101
                                                                                           TATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  24:580929/1‑101
                                                                                           TATAGTTGTGTCGTTAGGCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  13:1075776/1‑101
                                                                                           TATAGTTGTGTCGTTAGGCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  >  27:1075776/1‑101
                                                                                                                                                                                                
GAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGC....ATT....................................................................................................  <  NC_013198/1998857‑1998770
....................................................................................C....ATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT  <  NC_013198/1998886‑1998787

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG