BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	= 1038045	4 (0.005)	366 (0.490)	104/190	1.2	coding (872/978 nt)	LGG_01023	adenine specific DNA methylase Mod
*	?	NC_013198	1038906 =	0 (0.000)	366 (0.490)	104/190	1.2	intergenic (+13/‑238)	is36/LGG_01026	transposase IS4 family protein/type III restriction‑modification system methylation subunit
Continuation Left: 0 Continuation Right: 0

Only 100 of 416 total aligned reads displayed.


ACTTTGGAAAAACTGTGAACGTGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATCA  >  NC_013198/1038806‑1039006


tttgaaagagaacataaaagaataatataatttattcaaatcaagacaaggactcaaatggagcggggagagcaggagatgttaggagcccaaacctaagg                                                                                                      <  22:1083992‑M2/1‑1


tttgaaagagaacataaaagaataatataatttattcaaatcaagacaaggactcaaatggagcggggagagcaggagatgttaggagcccaaacctaagg                                                                                                      <  8:1083992‑M2/1‑1


   taaagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCa                                                                                                   >  18:632118‑M2/98‑101


   taaagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCa                                                                                                   >  4:632118‑M2/98‑101


    aaagagaacatcaaaggataatataaactattcaaatccagacaacgactcacatggagcgtggagagaaggagatgttagaagcccaaacctaagGGCaa                                                                                                  >  2:18194‑M2/97‑101


    aaagagaacatcaaaggataatataaactattcaaatccagacaacgactcacatggagcgtggagagaaggagatgttagaagcccaaacctaagGGCaa                                                                                                  >  16:18194‑M2/97‑101


    aaagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCaa                                                                                                  >  17:523278‑M2/97‑101


    aaagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCaa                                                                                                  >  3:523278‑M2/97‑101


    aaagagaacatcaaaggataatataaactattcaaatccacaaaacgactcaaacacagcctacagaccacgagaagatcggagaccaaccctaagCGCaa                                                                                                  >  27:279958‑M2/97‑101


    aaagagaacatcaaaggataatataaactattcaaatccacaaaacgactcaaacacagcctacagaccacgagaagatcggagaccaaccctaagCGCaa                                                                                                  >  13:279958‑M2/97‑101


     aagagaacatcaaaggataatataaactattgacatcccgacaacgacgcacatcgcgcgtggagaccaggagatgttaagagtccaaacctaggGTCAAc                                                                                                 >  16:944363‑M2/96‑101


     aagagaacatcaaaggataatataaactattgacatcccgacaacgacgcacatcgcgcgtggagaccaggagatgttaagagtccaaacctaggGTCAAc                                                                                                 >  2:944363‑M2/96‑101


         gaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTa                                                                                             <  18:356112‑M2/10‑1


         gaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTa                                                                                             <  4:356112‑M2/10‑1


          aacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTAc                                                                                            <  6:812472‑M2/11‑1


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatatat                                                                                     >  16:516812‑M2/84‑100


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatatat                                                                                     >  2:516812‑M2/84‑100


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataa                                                                                     >  5:458646‑M2/84‑101


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataa                                                                                     <  17:629099‑M2/18‑1


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataa                                                                                     >  19:458646‑M2/84‑101


                 aaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataa                                                                                     <  3:629099‑M2/18‑1


                  aggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataat                                                                                    >  15:960889‑M2/83‑101


                  aggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataat                                                                                    >  1:1027898‑M2/83‑101


                   ggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataata                                                                                   >  16:701597‑M2/82‑101


                   ggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataata                                                                                   <  27:628971‑M2/20‑1


                   ggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataata                                                                                   >  2:701597‑M2/82‑101


                    gataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAatat                                                                                  <  23:95628‑M2/21‑1


                    gataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAatat                                                                                  <  10:1063148‑M2/21‑1


                      taatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTa                                                                                >  15:744029‑M2/79‑101


                         tataagctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  15:1061747‑M2/26‑1


                         tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  4:1134134‑M2/26‑1


                         tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  28:391146‑M2/26‑1


                         tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             >  20:542940‑M2/76‑101


                         tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  18:1134134‑M2/26‑1


                         tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  14:391146‑M2/26‑1


                           taaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCt                                                                           >  6:952983‑M2/74‑101


                           taaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCt                                                                           >  20:952983‑M2/74‑101


                             aactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagCGCAACATTACGATATAATATTCCTGCTcc                                                                         <  19:285131‑M2/30‑1


                             aactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagCGCAACATTACGATATAATATTCCTGCTcc                                                                         <  5:285131‑M2/30‑1


                               ctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCa                                                                       >  19:721546‑M2/70‑101


                               ctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCa                                                                       >  5:721546‑M2/70‑101


                               ctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCa                                                                       <  1:635654‑M2/32‑1


                               ctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCa                                                                       <  15:635654‑M2/32‑1


                                 attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     <  23:287623‑M2/34‑1


                                 attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     <  9:287623‑M2/34‑1


                                   tcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATgg                                                                   >  22:476053‑M2/66‑101


                                   tcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATgg                                                                   >  8:476053‑M2/66‑101


                                   tcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATgg                                                                   <  22:247926‑M2/36‑1


                                    caaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGa                                                                  <  24:1154105‑M2/37‑1


                                         ccagacaacgactcaagtggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGAc                                                             >  12:27520‑M2/60‑101


                                           agacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCa                                                           >  3:243796‑M2/58‑101


                                           agacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCa                                                           <  15:390078‑M2/44‑1


                                           agacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCa                                                           >  17:243796‑M2/58‑101


                                           agacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCa                                                           <  1:390078‑M2/44‑1


                                            gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  13:35640‑M2/45‑1


                                            gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  14:258915‑M2/45‑1


                                            gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  28:258915‑M2/45‑1


                                            gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  27:35640‑M2/45‑1


                                                    atcaaatggagcgtggaaagaaggatatgttagcagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCAc                                                  <  26:227874‑M2/53‑1


                                                     tcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCAcc                                                 <  10:1160820‑M2/54‑1


                                                           ggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTaaaaa                                           >  6:170417‑M2/42‑101


                                                           ggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTaaaaa                                           >  20:170417‑M2/42‑101


                                                            gagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAAt                                          >  9:870988‑M2/41‑101


                                                            gagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAAt                                          <  7:463234‑M2/61‑1


                                                            gagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAAt                                          >  23:870988‑M2/41‑101


                                                            gagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAAt                                          <  21:463234‑M2/61‑1


                                                                  ggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTgg                                    <  13:795989‑M2/67‑1


                                                                   gagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGga                                   <  27:190702‑M2/68‑1


                                                                   gagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGga                                   <  13:190702‑M2/68‑1


                                                                   gagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGga                                   <  24:95665‑M2/68‑1


                                                                   gagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGga                                   <  10:95665‑M2/68‑1


                                                                       gcaggtgatgtaaggaacccaaacctacgAGCCACATTGCAATATAATATTGCGCCTCCCAAGGGACAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               <  11:699882‑M2/72‑1


                                                                       gcaggtgatgtaaggaacccaaacctacgAGCCACATTGCAATATAATATTGCGCCTCCCAAGGGACAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               <  25:699882‑M2/72‑1


                                                                       gcaggagatgttaggagcccaatcctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               <  12:693248‑M2/72‑1


                                                                       gcaggagatgttaggagcccaatcctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               <  26:693248‑M2/72‑1


                                                                       gcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               <  1:707787‑M2/72‑1


                                                                               tgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAg                       <  11:977954‑M2/80‑1


                                                                               tgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAg                       <  25:977954‑M2/80‑1


                                                                                 ttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGAt                     <  17:361078‑M2/82‑1


                                                                                 ttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGAt                     <  3:361078‑M2/82‑1


                                                                                 ttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGAt                     >  1:866082‑M2/20‑101


                                                                                            aacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGa          <  27:1014279‑M2/93‑1


                                                                                            aacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGa          <  13:1014279‑M2/93‑1


                                                                                              cctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGaaa        <  21:652309‑M2/95‑1


                                                                                              cctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGaaa        <  7:652309‑M2/95‑1


                                                                                                 aagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAATACCATTTTTCCACCTAAAAATGCGTGGAGATGGTCTAAAGATACAATTAATGaaaaaa     <  18:947469‑M2/98‑1


                                                                                                 aagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAATACCATTTTTCCACCTAAAAATGCGTGGAGATGGTCTAAAGATACAATTAATGaaaaaa     <  4:947469‑M2/98‑1


                                                                                                 aagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGaaaaaa     <  8:251611‑M2/98‑1


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAACGATACACTTAATGAAAAAAt    >  23:654266‑M2/3‑101


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAACGATACACTTAATGAAAAAAt    >  9:654266‑M2/3‑101


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    >  7:13715‑M2/3‑101


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    >  21:13715‑M2/3‑101


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    <  4:1028563‑M2/99‑1


                                                                                                  agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    <  18:1028563‑M2/99‑1


                                                                                                   gGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATc   <  22:75595‑M2/100‑1


                                                                                                   gGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATc   <  25:1201321‑M2/100‑1


                                                                                                   gGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATc   <  11:1201321‑M2/100‑1


                                                                                                   gGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATc   <  8:75595‑M2/100‑1


                                                                                                    ggCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAaaatca  <  24:357883/101‑1


                                                                                                    ggCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAaaatca  <  10:357883/101‑1


ACTTTGGAAAAACTGTGAACGTGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATCA  >  NC_013198/1038806‑1039006

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 30 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG