New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =432 (0.573)974 (1.292) 94/192 1.6 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998907 794 (1.011)intergenic (+500/‑177) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0

Only 100 of 1996 total aligned reads displayed.

ATTTGCTCGATAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGACAGGCGAGACTTTCGACAAAT  >  NC_013198/1998798‑1999006
                                                                                                                              |                                                                                                     
        gATAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT........TGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..t                                                                                                  <  6:134047/101‑1
         aTAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGt                                                                                                       <  27:959594/101‑1
         aTAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGt                                                                                                       <  20:944494/101‑1
          tAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTa                                                                                                      >  17:25736‑M2/1‑100
          tAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTa                                                                                                      >  3:25736‑M2/1‑100
            aTGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTAAACCACTA......T.......AATTGTaat                                                                                                    <  23:371257‑M2/101‑4
             tGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatg                                                                                                   >  15:43605‑M2/1‑97
               cTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgcc                                                                                                 >  4:670369‑M2/1‑95
               cTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgcc                                                                                                 >  18:670369‑M2/1‑95
               cTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgcc                                                                                                 >  27:1115980‑M2/1‑95
               cTGTTAGCAAGTGCAGACACGATGTATTTATT........TGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  21:1208277/101‑1
               cTGTTAGCAAGTGCAGACACGATGTATTTATT........TGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  24:703535/101‑1
                 gTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTaa                                                                                             <  13:53490/101‑1
                  ttAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAt                                                                                            <  27:546009/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACTACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  9:349334/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  20:161974/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  19:764850/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  1:974140/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  1:623626/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  1:169940/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  22:169874/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  6:438150/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  7:630106/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  23:666118/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  24:102983/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  24:304996/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  25:10511/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  7:337369/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  3:1147044/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  3:47654/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  4:1178253/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  6:928450/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  5:764850/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  10:288580/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  18:1178253/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  17:47654/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  17:1147044/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  11:873630/101‑1
                   tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGAATAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  9:1148076/101‑1
                     gCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAAAATGTTAAtt                                                                                           <  20:693640/101‑1
                      cAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgct                                                                                          >  8:868345‑M2/1‑88
                       aaGTGCAGACACGATGTATTTATTTATTCATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAAtt                                                                                           <  13:110315/101‑1
                           gCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaa                                                                                     >  15:238082‑M2/1‑83
                              gACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgt                                                                                  >  15:1043026‑M2/1‑80
                                   gATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGa                                                                           <  26:326405/101‑1
                                   gATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGa                                                                           >  7:895383/1‑101
                                    aTGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGAc                                                                          >  7:1182352/1‑101
                                       tatttatt....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAAt                                                                       <  21:911786/101‑1
                                            att....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgct                                                                    >  25:91699‑M2/1‑66
                                                   cATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcga                                                                 <  26:475234‑M2/101‑39
                                                         gCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgc                                                           >  21:655169‑M2/1‑57
                                                          cTGTTCTCCGTATGGCTGACTAACGACACAACTATAATGTTATCCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgct                                                          >  10:10087‑M2/1‑56
                                                           tGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctg                                                         >  16:80283‑M2/1‑55
                                                           tGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctg                                                         >  2:80283‑M2/1‑55
                                                              tctcCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgtta                                                      >  8:559443‑M2/1‑52
                                                              tctcCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGaa                                                    <  11:255319/101‑1
                                                               ctcCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttag                                                     >  5:1025764‑M2/1‑51
                                                               ctcCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttag                                                     >  19:1025764‑M2/1‑51
                                                                tcCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGc                                                  <  27:282696/101‑1
                                                                 ccTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagca                                                   >  21:359642‑M2/1‑49
                                                                   ttATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaag                                                 >  19:455863‑M2/1‑47
                                                                   ttATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaag                                                 >  5:455863‑M2/1‑47
                                                                    tATGGCTGACTAACGACACAACTATAATGTTAACCACTA......TAATTGTAAATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgtt                                                       >  20:479485‑M2/1‑53
                                                                     aTGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtg                                               >  19:176732‑M2/1‑45
                                                                     aTGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtg                                               >  5:176732‑M2/1‑45
                                                                       ggCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTAt                                           <  11:573291/101‑1
                                                                             cTAACGAAACAACTATAATGATAACAACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacg                                       >  12:1185501‑M2/1‑37
                                                                                aCGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatg                                    >  16:494542‑M2/1‑34
                                                                                aCGACACAACTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatg                                    >  2:494542‑M2/1‑34
                                                                                 cGACACAACTATAATGTTAACCACTATAATTGT.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagaca                                         >  12:766213‑M2/1‑39
                                                                                     acaACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGagataa                             >  28:342507/1‑101
                                                                                     acaACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGagataa                             >  12:318478/1‑101
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTaatgccatccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttatt                            >  16:1107636‑M2/1‑26
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTaatgccatccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttatt                            >  2:1107636‑M2/1‑26
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttatt                            >  6:68021‑M2/1‑26
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttatt                            >  15:700758‑M2/1‑26
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGagataagat                          <  17:948016/101‑1
                                                                                        aCTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGagataagat                          <  3:948016/101‑1
                                                                                         cTATAATGTTAACCTCTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattc                           >  13:26154‑M2/1‑25
                                                                                          tataATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattca                          >  13:868276‑M2/1‑24
                                                                                          tataATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAg                        >  25:596008/1‑101
                                                                                           ataATGTTAACCACTA......T.......AATTGTAA..TTTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGa                       <  16:202922/101‑1
                                                                                           ataATGTTAACCACTA......T.......AATTGTAA..TTTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGa                       <  2:202922/101‑1
                                                                                            taATGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatt                        >  23:1150463‑M2/1‑22
                                                                                             aaTGTTACCCACTA......T.......AATGGTaatgccagccgctggtaatgtcaagcatatttgctagataatgctgttagcaagtgcagacacgatgtatttattcattt                       >  1:349894‑M2/1‑21
                                                                                              aTGTTAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttg                      >  25:280495‑M2/1‑20
                                                                                              aTGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGACAg                    <  12:457664/101‑1
                                                                                               tGTTAACCACTA......T.......AATTGTaatgccagcctctggttatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttgg                     >  9:643126‑M2/1‑19
                                                                                               tGTGAACCACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttgg                     >  8:155564‑M2/1‑19
                                                                                                  aaacCACCA......T.......AATTGTaatgccatctgctggtaatgtcaagcatatatgctcgataatgttgatagcacgtgcagacacgatgtatttattcatttggctg                  >  26:1197857‑M2/2‑16
                                                                                                      cACTA......T.......AATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttct              >  14:321629‑M2/1‑12
                                                                                                       aCTA......T.......AATTGTaatgccacgcgctcgtaatgtcgagcatagttgctcgataaggcttttatgaagtgcagacacgatgtatttattcatttggctgttctc             >  5:927874‑M2/1‑11
                                                                                                       aCTA......T.......AATTGTaatgccacgcgctcgtaatgtcgagcatagttgctcgataaggcttttatgaagtgcagacacgatgtatttattcatttggctgttctc             >  19:927874‑M2/1‑11
                                                                                                          a......t.......aATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctcctt          >  4:395855‑M2/1‑8
                                                                                                          a......t.......aATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctcctt          >  22:646639‑M2/1‑8
                                                                                                          a......t.......aATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctcctt          >  18:395855‑M2/1‑8
                                                                                                          a......t.......aATTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctcctt          >  10:636774‑M2/1‑8
                                                                                                                         aaTTGTaatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctccttat        >  11:1006377‑M2/1‑6
                                                                                                                          aTTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGACAGGCGAGACTTTCGACa     <  22:884890/101‑1
                                                                                                                              taatgccagccgctggtaatgtcaagcatatttgctcgataatgctgttagcaagtgcagacacgatgtatttattcatttggctgttctccttatggctg   >  26:77033‑M2/1‑1
                                                                                                                              |                                                                                                     
ATTTGCTCGATAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTCTCCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTA......T.......AATTGTAA..TGTTAATTGTATTCATCTGTCAGACAATGATAGATGTTATTTTCGAAGCAGTGTATCCCTGCGGAGATAAGATAGACAGGCGAGACTTTCGACAAAT  >  NC_013198/1998798‑1999006

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG