New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =NA (NA)4444 (8.869) 109/192 0.3 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998907 NA (NA)intergenic (+500/‑177) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0

Only 100 of 5038 total aligned reads displayed.

TAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.......................................................................................................  <  NC_013198/1998873‑1998770
....................................................................................................CATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTA  <  NC_013198/1998907‑1998808
                                                                                                                                                                                                               
 AGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCA                                                                                                           >  13:989677/1‑101
       CCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAA                                                                                                    >  12:581331/1‑101
         ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATT                                                                                                  >  11:1138895/1‑101
            AGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATA                                                                                               >  18:959538/1‑101
             GGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAG                                                                                              >  12:1038573/1‑101
               AGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTG                                                                                            >  9:260432/1‑101
                 AACAGCCAAATGAATAAATACATAGTGTCTGCACTTGCTAACAGCAGTATCGAGCAAATATGCTTGACAGTACCAGCGGCTGGCATC.ACAATTATCGTGGT                                                                                          >  25:779387/1‑101
                  ACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTT                                                                                         >  13:346867/1‑101
                    AGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAA                                                                                       >  28:980968/1‑101
                    AGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAATGGTTAA                                                                                       >  17:52946/1‑101
                     GCCAAATGAATAAATACATTGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAAC                                                                                      >  26:71034/1‑101
                     GCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAAC                                                                                      >  22:601429/1‑101
                       CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACAT                                                                                    >  11:633793/1‑101
                       CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACAT                                                                                    >  10:913529/1‑101
                       CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACAT                                                                                    >  15:963630/1‑101
                        AAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATT                                                                                   >  10:538016/1‑101
                         AATGAATAAATCCATCGTGTCTGCCCTTGCTAACAGCAGTATCGAGCAAATATGGATGACACTACCAGCGACTTGCATT.ACAATTATAGTGATTAACATTg                                                                                  >  15:683149/1‑100
                          ATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTAT                                                                                 >  8:224745/1‑101
                          ATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTAT                                                                                 >  1:690735/1‑101
                            aAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGCGGTTAACATTATAG                                                                               >  17:184644/2‑101
                            GAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAG                                                                               >  27:788863/1‑101
                             AATTAACACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCATCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGT                                                                              >  12:886166/1‑101
                              ATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTT                                                                             >  12:189879/1‑101
                               TAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTG                                                                            >  20:1226977/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGT                                                                           >  2:643752/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGT                                                                           >  22:999091/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGT                                                                           >  15:18875/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGT                                                                           >  9:684638/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTG                                                                          >  30:918880/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTG                                                                          >  13:674893/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAAAATTATAGTTGTG                                                                          >  6:123439/1‑101
                                 AATACAGCGTGTCTGCACTTGCTAACAGAATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTG                                                                          >  26:305237/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CG                                                                     >  14:218613/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CG                                                                     >  20:85591/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CG                                                                     >  23:794466/1‑101
                                     CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGT                                                                    >  29:475222/1‑101
                                     CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGT                                                                    >  17:812758/1‑101
                                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTT                                                                   >  7:700353/1‑101
                                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTT                                                                   >  9:106728/1‑101
                                       TCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTg                                                                  >  21:996211/1‑100
                                            TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAG                                                             >  26:1083559/1‑101
                                             CTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGC                                                            >  10:1010499/1‑101
                                              TGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCC                                                           >  19:479554/1‑101
                                              TGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCC                                                           >  3:479554/1‑101
                                                CACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTTACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCA                                                          >  11:318887/1‑101
                                                CACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCAT                                                         >  28:117926/1‑101
                                                 ACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGTGTCGTTAGTCAGCCA                                                          >  24:397837/1‑101
                                                 ACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATA                                                        >  1:95745/1‑101
                                                  CTTGGTAAGAGCATTATAGTGCAAATCTGCTTGTCATTACTAGCGGCTGGCGTT.ACCAGTATAGGGGTTACCATTATAGTTGTGT..ACTTAGTAAGCCATAA                                                       >  27:446523/1‑101
                                                    TGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGG                                                     >  7:1204075/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAG                                                   >  18:350233/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAG                                                   >  29:154593/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAG                                                   >  30:208102/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAG                                                   >  4:304003/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAG                                                   >  30:547463/1‑101
                                                        AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAA                                                 >  20:492949/1‑101
                                                        AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAA                                                 >  8:1030943/1‑101
                                                         ACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAAC                                                >  24:841172/1‑101
                                                          CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACCATTATAGTGGTTAACATTATAGATGTGT..CGTTAGTCAGCCATAAGGAGAACA                                               >  14:932109/1‑101
                                                          CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACA                                               >  27:158040/1‑101
                                                          CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACA                                               >  23:177997/1‑101
                                                            GCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGC                                             >  6:882735/1‑101
                                                              ATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCA                                           >  21:358133/1‑101
                                                               TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAA                                          >  26:975066/1‑101
                                                               TTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAA                                          >  18:639190/1‑101
                                                                TATCGAGCAAACATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAA                                         >  5:1071643/1‑101
                                                                  TCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATG                                       >  2:961133/1‑101
                                                                     tGCAAATATGCTTGACATTACCAGCTGCTGTCATT.ACAATTATAGTGGTTAACATTATAGCTGTGT..CGTTAGTCAGCCATAAGGAGCACAGCCAAATGAAT                                    >  31:182642/2‑101
                                                                     AGCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAAT                                    >  13:1154650/1‑101
                                                                      GCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATA                                   >  19:77881/1‑101
                                                                      GCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATA                                   >  3:77881/1‑101
                                                                      GCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATA                                   >  8:656028/1‑101
                                                                      GCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATA                                   >  7:368726/1‑101
                                                                      GCAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTAGAGGGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATA                                   >  29:781965/1‑101
                                                                       CAAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAAGATTATAGTTATGT..CGTTAGTCAGCCATAAGGAGAACAGGCGAATGAATAA                                  >  5:251585/1‑101
                                                                        AAATATGCTTGACATTTCCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAA                                 >  31:664785/1‑101
                                                                        AAATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAA                                 >  6:454910/1‑101
                                                                          ATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATA                               <  4:735699/101‑1
                                                                          ATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATA                               <  21:1210477/101‑1
                                                                          ATATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATA                               >  14:55498/1‑101
                                                                            ATGCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACA                             >  25:1211792/1‑101
                                                                              GCTTGGCATTACCAGCGGCTGGCATT.AAAATTCTAGTGGATAACATTATAGTTGTGT..CGCTAGTCAGCCATAAGGACAACAGCCAAATGAATAAATACATC                           >  24:1162437/1‑101
                                                                              GCTTGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATC                           >  1:1125263/1‑101
                                                                                 TGACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTG                        >  31:955568/1‑101
                                                                                  GACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGT                       >  5:54408/1‑101
                                                                                  GACATTACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAAT....AAATACATCGTGTCTGC                   >  28:322738/1‑101
                                                                                       TACCAGCGGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCA                  >  5:877460/1‑101
                                                                                              GGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTA           >  19:12881/1‑101
                                                                                              GGCTGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTA           >  3:12881/1‑101
                                                                                                 TGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA        >  28:706011/1‑101
                                                                                                 TGGCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA        >  25:428696/1‑101
                                                                                                   GCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGC      >  22:218560/1‑101
                                                                                                   GCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGC      >  2:1122815/1‑101
                                                                                                   GCATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGC      >  21:654131/1‑101
                                                                                                    aATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  18:1117741/2‑101
                                                                                                    aATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  23:532585/2‑101
                                                                                                    aATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  10:134902/2‑101
                                                                                                    aATT.ACAATTA..GTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATT   >  2:371322/2‑101
                                                                                                     ATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCAT    >  4:1118465/1‑101
                                                                                                      TT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATT   >  1:389151/1‑101
                                                                                                                                                                                                               
TAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.......................................................................................................  <  NC_013198/1998873‑1998770
....................................................................................................CATT.ACAATTATAGTGGTTAACATTATAGTTGTGT..CGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTA  <  NC_013198/1998907‑1998808

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG