New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998841 =2974 (5.698)8 (0.016) 24/192 3.1 intergenic (+434/‑243) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998844 3000 (5.748)intergenic (+437/‑240) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 4
Rejected: Position hash score below cutoff.

Only 100 of 156 total aligned reads displayed.

ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATA.................................................................................  <  NC_013198/1998940‑1998841
..........................................................................................................AAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCA  <  NC_013198/1998844‑1998772
                                                                                                                                                                                           
ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAA                                                                                  <  10:1063917/101‑1
ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAA                                                                                  <  26:1063917/101‑1
ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGGTAACATTATAATTGTGGCGTTAGTCAGCCATAAGG.AGAAGAGCAAAAT.G...AATAA                                                                                  >  17:114444/1‑101
ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGGTAACATTATAATTGTGGCGTTAGTCAGCCATAAGG.AGAAGAGCAAAAT.G...AATAA                                                                                  >  1:114444/1‑101
 TCATTGTCTGACAGATTAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCACAT.G...AATAAA                                                                                 <  10:903267/101‑1
 TCATTGTCTGACAGATTAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCACAT.G...AATAAA                                                                                 <  26:903267/101‑1
 TCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAA                                                                                 >  7:283266/1‑101
 TCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAA                                                                                 >  23:283266/1‑101
  aATTGTCTGACAGATCAACAGACTCAACATAGCAATT.ATAGTGGTTAACATTATAGTTGTGTCGTACTGCAGCCATAAGG.AGACCAGCCAAAT.G...AATAAAT                                                                                <  24:11080/100‑1
  aATTGTCTGACAGATCAACAGACTCAACATAGCAATT.ATAGTGGTTAACATTATAGTTGTGTCGTACTGCAGCCATAAGG.AGACCAGCCAAAT.G...AATAAAT                                                                                <  8:11080/100‑1
  CATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT                                                                                <  6:685885/101‑1
  CATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT                                                                                <  22:685885/101‑1
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTTGTTAACATTATAGTTTTGGCGTTATTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           <  27:245742/101‑1
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTTGTTAACATTATAGTTTTGGCGTTATTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           <  11:245742/101‑1
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           <  6:611961/101‑1
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           >  21:785070/1‑101
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           >  5:785070/1‑101
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           <  22:611961/101‑1
   ATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....A                                                                           >  7:1207498/1‑101
                       AATTAGCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  31:296096/1‑101
                       AATTAGCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  15:296096/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  22:414346/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  21:599143/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  23:848626/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  30:579661/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  25:512395/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  30:511036/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  9:512395/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  31:1087893/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  4:362799/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  5:599143/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  6:414346/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  7:848626/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  20:362799/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTT                                                   >  14:511036/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAACAGCCAAATGAAT....AAATA....CATCGTGTCTGC                                                       >  20:950768/1‑101
                       AATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.ACAACAGACAAAT.G...CATAAAT....AAATA....CATCTTGTCTGCACTT                                                   >  25:482976/1‑101
                            gCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAA                                              >  10:436484/2‑101
                            gCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAA                                              >  5:1068575/2‑101
                            gCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAA                                              >  26:436484/2‑101
                            gCATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAA                                              >  21:1068575/2‑101
                             aATTACAATTTTTAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATAAATACATCGTGTCTGCACTTG                                                  >  2:720388/2‑101
                             aATTACAATTTTTAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATAAATACATCGTGTCTGCACTTG                                                  >  18:720388/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAATGAATAAATA....CATCGTGTCTGCACTTGC                                                 >  2:381887/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAAC                                             >  22:633858/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAAC                                             >  6:633858/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAAC                                             >  3:703357/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAAC                                             >  19:703357/2‑101
                             aATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAAC                                             >  23:196226/2‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  9:394664/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  2:823949/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  12:508834/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  13:911263/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  18:823949/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  29:911263/1‑101
                              ATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACA                                            >  28:508834/1‑101
                               TTACAATT.ATAGTCGCTAATATTATCCAGGCACCGTACGTCCGCCACAAGG.AGCACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAG                                           >  13:24110/1‑101
                               TTACAATT.ATAGTCGCTAATATTATCCAGGCACCGTACGTCCGCCACAAGG.AGCACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAG                                           >  29:24110/1‑101
                                TACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGGAGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAG                                           >  24:874357/1‑101
                                TACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGGAGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAG                                           >  8:874357/1‑101
                                TACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGC                                          >  14:629206/1‑101
                                  CAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCAT                                        >  27:932763/1‑101
                                  CAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCAT                                        >  31:456117/1‑101
                                  CAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCAT                                        >  11:932763/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  4:205588/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  3:597875/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  19:597875/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  20:205588/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  9:298793/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  25:298793/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  17:46587/1‑101
                                   AATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATT                                       >  18:164370/1‑101
                                    ATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTA                                      >  30:346094/1‑101
                                    ATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTA                                      >  1:978401/1‑101
                                    ATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTA                                      >  14:346094/1‑101
                                      T.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCACAT.G...AATAAAT....AAATA....CATCATGTCTGCACTTGCTAACAGCATTATt                                    >  19:603328/1‑100
                                      T.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCACAT.G...AATAAAT....AAATA....CATCATGTCTGCACTTGCTAACAGCATTATt                                    >  3:603328/1‑100
                                      T.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATa                                    >  30:368229/1‑100
                                         TAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGA                                  >  27:1155834/1‑101
                                         TAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGA                                  >  11:1155834/1‑101
                                          AGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAG                                 >  23:1037935/1‑101
                                          AGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAG                                 >  7:1037935/1‑101
                                          AGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAG                                 >  24:806824/1‑101
                                          AGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAG                                 >  8:806824/1‑101
                                           GTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGC                                >  18:939181/1‑101
                                           GTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGC                                >  14:440285/1‑101
                                            TGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAATGAATAAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCG                                   >  10:968206/1‑101
                                            TGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAATGAATAAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCG                                   >  26:968206/1‑101
                                              GTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAA                             >  30:176675/1‑101
                                                   CATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGC                        >  12:1125664/1‑101
                                                   CATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGC                        >  28:1125664/1‑101
                                                    ATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....AATCGTGTCTGCACTGGCTAACAGCATTATCGAGCAAATATGCT                       >  15:112876/1‑101
                                                     TTATAGTTGTGTCTTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTT                      >  18:148203/1‑101
                                                     TTATAGTTGTGTCTTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTT                      >  2:148203/1‑101
                                                          GTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT                 >  11:988809/1‑101
                                                          GTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACAT                 >  14:333121/1‑101
                                                                  GTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCG         >  28:1063781/1‑101
                                                                   TTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGG        >  14:1028393/1‑101
                                                                   TTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGG        >  30:1028393/1‑101
                                                                         AGCCATAAGG.AGAACAGCCAAAT.G...AATAAAT....AAATA....CATCGTGTCTGCACCTGCTAACATCATTATCGCGCAAATATGCTTGAAATTACCAGCGCCTGGCA  >  4:85597/1‑101
                                                                                                                                                                                           
ATCATTGTCTGACAGATGAATACAATTAACATTACAATT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGG.AGAACAGCCAAAT.G...AATA.................................................................................  <  NC_013198/1998940‑1998841
..........................................................................................................AAT....AAATA....CATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCA  <  NC_013198/1998844‑1998772

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG