BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	1998841 =	2974 (5.698)	8 (0.016)	24/192	3.1	intergenic (+434/‑243)	lciIC/LGG_01955	XRE family transcriptional regulator/reverse transcriptase‑like protein
*	?	NC_013198	= 1998844	3000 (5.748)	8 (0.016)	24/192	3.1	intergenic (+437/‑240)	lciIC/LGG_01955	XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0 Continuation Right: 4
Rejected: Position hash score below cutoff.

Only 100 of 3010 total aligned reads displayed.


CGTTGGTCGCGGGTGAGACTTTCGCAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTCATCTGTCAGACAATGATAGAT  >  NC_013198/1998745‑1998944


 atggctgactaacgacacaactatAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....Ca                                                                                                      >  4:909349‑M1/25‑101


          gggTGAGACTTTCGCAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGt                                                                                             <  2:383287/101‑1


          gggTCAGACTTTCGCAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGt                                                                                             <  14:47100/101‑1


               acacaactatAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.cc                                                                                      >  31:1228386‑M1/11‑101


                             ccAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTT............GGCTGTT.CT.CCTTATGGCTGACTAACGACACaa                                                                <  5:121476/101‑1


                                  cGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGaca                                                                   <  7:823123/101‑1


                                   gCTTGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGacac                                                                  <  15:303450/101‑1


                                   gCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGacac                                                                  <  21:1022239/101‑1


                                   gCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTAAGGCTGACTAACGacac                                                                  <  6:967876/101‑1


                                      ggTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAAc                                                               <  21:595608/101‑1


                                      ggTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAAc                                                               <  6:1088184/101‑1


                                      ggTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAAc                                                               <  14:728898/101‑1


                                      ggTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAAc                                                               <  22:503055/101‑1


                                       gTAATGTCAAGCATATTTGCTCGATAATAATGCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGAcaca                                                                 <  13:549275/101‑1


                                       gTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACt                                                              <  25:1156735/101‑1


                                       gTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACt                                                              <  13:964041/101‑1


                                         aaTGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACtat                                                            <  30:322388/101‑1


                                              cAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGt                                                       <  18:348355/101‑1


                                              cAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGt                                                       <  27:782047/101‑1


                                              cAACCATATTTGCTCGATACT...GCTGTTAAGAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGt                                                       <  15:1125864/101‑1


                                               aaGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGtt                                                      <  2:1136800/101‑1


                                                aGCATATTTTCTCGAGAAT...GCTATTAGCAAGTGCAGACACGATGTCTTTATT....CATTTGGCTGTG.CT.CCTTATGGCTGACTAACTACACAACTATAATGTTa                                                     <  15:564481/101‑1


                                                aGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGttt                                                     <  18:695540/101‑2


                                                aGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTa                                                     <  13:222692/101‑1


                                                 gCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATTTATTCATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATg                                                        <  28:1125664/101‑1


                                                 gCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTaa                                                    <  24:906198/101‑1


                                                  cATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAAc                                                   <  23:1089590/101‑1


                                                  cATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAAc                                                   <  6:351510/101‑1


                                                  cATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAAc                                                   <  9:153977/101‑1


                                                   atatTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAAcc                                                  <  29:384950/101‑1


                                                     atTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCAc                                                <  20:315013/101‑1


                                                     atTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTACAATGTTAACCAc                                                <  26:693560/101‑1


                                                     atTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTT...........TGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtg                                         <  28:370699/101‑2


                                                      tttTCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATTGCTGACTAACGACACAACTATAATGTTAACCACt                                               <  22:130656/101‑1


                                                      tttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATTTATTCATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAAc                                                   <  14:176675/101‑1


                                                      tttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTTTCT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCAc                                                <  12:906564/101‑1


                                                      tttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACt                                               <  1:118219/101‑1


                                                      tttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACt                                               <  17:118219/101‑1


                                                      tttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACAAAACTATAATGTTAAGCACt                                               >  10:272328/1‑101


                                                      gttGCTCTATAAT...GCTGTTATCAAGTGCAGACGATATGGATTTATG....CATTTGGCTGCT.AG.CGTTCTGGCTGACTAACAACACAACTATAATGTTAACCACt                                               <  18:1063712/100‑1


                                                       ttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACta                                              <  3:212222/101‑1


                                                       ttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACta                                              <  19:212222/101‑1


                                                       ttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACta                                              <  17:747963/101‑1


                                                       ttGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACta                                              <  1:747963/101‑1


                                                        tGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACtat                                             <  9:1020204/101‑1


                                                        tGCCCGACAAC...GTTGTTAGAAAGTGGAAACGTGATTTTTTTATT....CTTTTTGC.GTT.CTTCCTTTGGGGCCATAAGCGCCACAACTATAATGTTAACCATtat                                             <  29:1115904/101‑1


                                                         gCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGATGTT.CT.CCTTATGGCTAACTAACGACAAAACTATAATGTTACCCACTATa                                            >  30:954341‑M2/1‑100


                                                          cTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaa                                           >  5:816839‑M2/1‑99


                                                          cTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaa                                           >  7:136008‑M2/1‑99


                                                          cTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaa                                           >  20:1111132‑M2/1‑99


                                                           tCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaat                                          >  7:43322‑M2/1‑98


                                                           tCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaat                                          >  30:543469‑M2/1‑98


                                                           tCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaat                                          >  9:720570‑M2/1‑98


                                                           tCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATaat                                          >  11:274531‑M2/1‑98


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTCTT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  24:583601/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  10:547651/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  31:684352/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  11:647182/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  25:855967/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  4:138687/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  24:291775/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  12:546347/101‑1


                                                            cGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAAtt                                         <  23:570957/101‑1


                                                            cGATAAT...GCTGTTAGCAAGGTCAGACACGATGTTTTTATT....CATTTGCCTGTT.CT.CCTTATGGCGGACTACCGACACAACTATAATGTTAACCACTATAAtt                                         <  31:445747/101‑1


                                                            cGATAAT...GCTGGTAGCAAGTGCAGACACGATGTATTGATT....CATTTGGCTGGT.CT.CCTTATGGCTGACTAACGACACAACAATAATGTTAACCACTATAAtt                                         <  21:275714/101‑1


                                                              aTAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGt                                       <  25:305420/101‑1


                                                                       cTGTTAGCAAGTGCAGACACTATGTATTTATT........TGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  30:1058797/101‑1


                                                                       cTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGtt                                 <  28:753342/101‑1


                                                                           tAGCAAGTGTAAACACTGTGTATTTAGT....AATGTGGATGTT.AT.CCTTATGGCTGACTAACGACACAACTATAATGGTAACCACTATAATTTTAATGTTAAtt                             <  12:217079/101‑1


                                                                           tAGCAAGTGGAGACACTATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  19:455377/101‑1


                                                                           tAGCAAGTGGAGACACTATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  3:455377/101‑1


                                                                           tAGCAAGTGGAGACACTATGTATTTATT....CATTTGGCTGGT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  23:958943/101‑1


                                                                           tAGCAAGTGCAGACACGATTTATTTATT....CATTTGTCTTTT.CT.CCTTATGGCTGACTAACGACACAACTATAATTTTAACCACTATAATTGTAATGTTAAtt                             <  10:957417/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CCTTTGGTTGGT.CT.CCTTATTGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  19:1011225/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CCTTTGGTTGGT.CT.CCTTATTGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  3:1011225/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAGCCACTATAATTGTAATGTTAAtt                             <  10:1000080/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  1:387691/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  26:1169242/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  26:38702/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  8:761752/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  8:1167987/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  27:1121907/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  11:943554/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  27:456933/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  6:675597/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  15:875779/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  17:387691/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  23:246066/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  22:786614/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  2:739792/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  3:863429/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAAtt                             <  19:863429/101‑1


                                                                           tAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTAGAATGTTAACCACTATAATTGTAATGTGAAta                             <  5:426210/101‑2


                                                                               aaGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTAt                         <  8:465773/101‑1


                                                                               aaGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTAt                         <  21:979093/101‑1


                                                                                aGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTAtt                        <  25:59268/101‑1


                                                                                 gTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTc                       <  9:51100/101‑1


                                                                                     aGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTCATCt                   <  29:716490/101‑1


                                                                                     aGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTCATCt                   <  20:689491/101‑1


                                                                                             tGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTCATCTGTCAGACa           >  4:521251/1‑101


CGTTGGTCGCGGGTGAGACTTTCGCAATGCCAGCCGCTGGTAATGTCAAGCATATTTGCTCGATAAT...GCTGTTAGCAAGTGCAGACACGATGTATTTATT....CATTTGGCTGTT.CT.CCTTATGGCTGACTAACGACACAACTATAATGTTAACCACTATAATTGTAATGTTAATTGTATTCATCTGTCAGACAATGATAGAT  >  NC_013198/1998745‑1998944

Base quality scores:


ATCG

< 3 ≤


ATCG

< 16 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG