New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	807226 =	524 (1.011)	48 (0.093)	12/176	7.8	coding (19/153 nt)	LGG_00795	hypothetical protein
	?	NC_013198	= 807588	464 (0.788)				intergenic (+228/‑81)	LGG_00795/yfnB	hypothetical protein/haloacid dehalogenase‑like family hydrolase
Continuation Left: 0  Continuation Right: 0
Rejected: Position hash score below cutoff.

CCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA........................................................................  <  NC_013198/807297‑807226 .....................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGG.CC.TGGGACGTGATGGCCGGGTTTTGGCCATTG  <  NC_013198/807588‑807531                                                                          ||||||||||||                                                             CCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGA                                              <  21:1073213/101‑1 CCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGA                                              <  4:678891/101‑1 CCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGA                                              <  10:1073213/101‑1 CCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGA                                              <  15:678891/101‑1                               TTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGG               >  5:1030912/1‑101                               TTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGG               >  16:1030912/1‑101                                TACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGt              >  20:102678/1‑100                                TACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGt              >  9:102678/1‑100                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  8:583124/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  19:265689/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  21:410949/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  19:583124/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           <  13:366475/101‑1                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           <  2:366475/101‑1                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  11:151025/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  8:265689/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  22:151025/1‑101                                   ACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTT           >  10:410949/1‑101                                       AGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGC       >  2:706521/1‑101                                       AGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGC       <  21:502448/101‑1                                       AGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGC       >  13:706521/1‑101                                       AGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGC       <  10:502448/101‑1                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      >  21:874925/1‑101                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      >  21:982751/1‑101                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      <  17:187304/101‑1                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      <  6:187304/101‑1                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      >  10:982751/1‑101                                        GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCC      >  10:874925/1‑101                                          TTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCAT    <  7:350504/101‑1                                          TTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCAT    <  18:350504/101‑1                                          TTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCAT    <  1:1138605/101‑1                                          TTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCAT    <  12:1138605/101‑1                                           TTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATT   <  6:1007161/101‑1                                           TTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATT   <  17:1007161/101‑1                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  <  7:717419/101‑2                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  <  8:604700/101‑2                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  8:809745/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  9:492862/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  6:1002001/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  4:454497/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  20:492862/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  19:809745/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  <  19:604700/101‑2                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  <  18:717419/101‑2                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  17:1002001/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGG.CCCTGGACCGAAATGGCCGGTTTTTGGCCATTt  >  15:454497/1‑100                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCAGAATGTAAGTGGTCC.TGGACCGAAATGGCCGGTTTTTGGCCATTt  <  2:278350/101‑2                                            TCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCAGAATGTAAGTGGTCC.TGGACCGAAATGGCCGGTTTTTGGCCATTt  <  13:278350/101‑2                                                                          ||||||||||||                                                             CCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA........................................................................  <  NC_013198/807297‑807226 .....................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGG.CC.TGGGACGTGATGGCCGGGTTTTGGCCATTG  <  NC_013198/807588‑807531 Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG