BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	= 1038045	94 (0.168)	330 (0.590)	85/190	0.8	coding (872/978 nt)	LGG_01023	adenine specific DNA methylase Mod
*	?	NC_013198	1038906 =	38 (0.065)	330 (0.590)	85/190	0.8	intergenic (+13/‑238)	is36/LGG_01026	transposase IS4 family protein/type III restriction‑modification system methylation subunit
Continuation Left: 0 Continuation Right: 0

Only 100 of 398 total aligned reads displayed.


TTTGGAAAAACTGTGAACGTGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATCA  >  NC_013198/1038808‑1039006


   aagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAAc                                                                                                 <  22:983823‑M2/6‑1


   aagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAAc                                                                                                 >  4:53836‑M2/96‑101


   aagagaacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAAc                                                                                                 >  15:53836‑M2/96‑101


   aagagaacatcaaaggataatataaactattcaaaaccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAAc                                                                                                 >  22:1036239‑M2/96‑101


    agagaacaaaaaaggataatataaccgagtcaaatccagacaaccactaaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACa                                                                                                <  20:189888‑M2/7‑1


      agaacaaaaagggaaaaaataaactatgcaaagccagccaccgctccaagtggcgcgtggagagcaggagatgttaggagcccaaacctaagGGCAACAtt                                                                                              <  7:157582‑M2/9‑1


      agaacaaaaagggaaaaaataaactatgcaaagccagccaccgctccaagtggcgcgtggagagcaggagatgttaggagcccaaacctaagGGCAACAtt                                                                                              <  18:157582‑M2/9‑1


        aacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTAc                                                                                            <  7:67938‑M2/11‑1


        aacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTAc                                                                                            <  18:67938‑M2/11‑1


        aacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTAc                                                                                            >  1:61096‑M2/91‑101


        aacatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTAc                                                                                            <  9:632332‑M2/11‑1


         acatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACg                                                                                           >  16:1149083‑M2/90‑101


         acatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACg                                                                                           >  5:1149083‑M2/90‑101


         acatcaaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACg                                                                                           >  9:421494‑M2/90‑101


           atcaaaggataatatgaactattcaaatccagacaacgactcaaatggagcgtcgagagcaggaggtgttaggagcccacacctaagAGAAACGTTACGat                                                                                         >  15:1086368‑M2/88‑101


           atcaaaggataatatgaactattcaaatccagacaacgactcaaatggagcgtcgagagcaggaggtgttaggagcccacacctaagAGAAACGTTACGat                                                                                         >  4:1086368‑M2/88‑101


             caaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatat                                                                                       >  7:1035625‑M2/86‑101


             caaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatat                                                                                       >  18:1035625‑M2/86‑101


             caaaggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatat                                                                                       <  10:69545‑M2/16‑1


             aaaagaataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGatat                                                                                       <  11:1211989‑M2/16‑1


              caaaggataatataaactattcaaatccagccacggctcaaattgaggggggggggcaggaggaggtaagaggccaaaactaagGGGAACAATAAGAtata                                                                                      >  17:681537‑M2/85‑101


              caaaggataatataaactattcaaatccagccacggctcaaattgaggggggggggcaggaggaggtaagaggccaaaactaagGGGAACAATAAGAtata                                                                                      >  6:681537‑M2/85‑101


               aaggataatataaactattcaaatccatacaacgactcacatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCCACATTACGATataa                                                                                     <  12:117298‑M2/18‑1


               aaggagaaaaaaaactattcaactcaagagaacggctcaaatggggcggggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataa                                                                                     <  21:933746‑M2/18‑1


                aggataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATataat                                                                                    <  1:759151‑M2/19‑1


                aCGTGCGCTTACCAGCCTGCTTCAAATGTTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATataat                                                                                    <  19:562530/101‑1


                aCGTGCGCTTACCAGCCTGCTTCAAATGTTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATataat                                                                                    <  8:562530/101‑1


                  gataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagtccaaacctaagGGCAACATTACGATATAatat                                                                                  <  11:753465‑M2/21‑1


                   ataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttagtagcccaaacctaagGGCAACATTACGATATAATAtt                                                                                 >  2:14935‑M2/80‑101


                   ataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttagtagcccaaacctaagGGCAACATTACGATATAATAtt                                                                                 >  13:14935‑M2/80‑101


                   ataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATAtt                                                                                 >  4:18087‑M2/80‑101


                   ataatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATAtt                                                                                 >  15:18087‑M2/80‑101


                    taatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTa                                                                                <  4:90155‑M2/23‑1


                    taatataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTa                                                                                <  15:90155‑M2/23‑1


                     aatagaaactattaaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTAc                                                                               <  19:205149‑M2/24‑1


                     aatagaaactattaaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTAc                                                                               <  8:205149‑M2/24‑1


                      ccTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACt                                                                              <  10:1031477/101‑1


                      atataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACt                                                                              >  17:331526‑M2/77‑101


                      atataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACt                                                                              >  6:331526‑M2/77‑101


                      atataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACt                                                                              <  5:584112‑M2/25‑1


                      atataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACt                                                                              <  16:584112‑M2/25‑1


                       tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  12:722197‑M2/26‑1


                       tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  13:561291‑M2/26‑1


                       tataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTg                                                                             <  2:561291‑M2/26‑1


                        ataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGc                                                                            >  17:485844‑M2/75‑101


                        ataaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGc                                                                            >  6:485844‑M2/75‑101


                         taagctattcaaatccagacaacgactcaaatggagcgtggagagcagcagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCt                                                                           <  3:706548‑M2/28‑1


                         taagctattcaaatccagacaacgactcaaatggagcgtggagagcagcagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCt                                                                           <  14:706548‑M2/28‑1


                         taaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCt                                                                           <  9:231264‑M2/28‑1


                          aaactattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTc                                                                          >  12:956133‑M2/73‑101


                             ctattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCa                                                                       >  1:885641‑M2/70‑101


                              tattcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCaa                                                                      <  12:33764‑M2/33‑1


                               attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     >  7:354693‑M2/68‑101


                               attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     >  18:354693‑M2/68‑101


                               attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     >  5:991090‑M2/68‑101


                               attcaaatccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAAt                                                                     >  16:991090‑M2/68‑101


                                agTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATg                                                                    <  2:488387/101‑1


                                agTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATg                                                                    <  13:488387/101‑1


                                     atccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagTGCAACATTACGATATAATATTACTGCTCCCAATGGAAAg                                                               >  21:1119564‑M2/62‑101


                                     atccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAg                                                               <  20:767162‑M2/40‑1


                                     atccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAg                                                               >  21:659063‑M2/62‑101


                                      tccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGa                                                              <  10:938463‑M2/41‑1


                                       ccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGAc                                                             >  19:861774‑M2/60‑101


                                       ccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGAc                                                             >  8:861774‑M2/60‑101


                                       ccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACCGCTCCCAATGGAACGAc                                                             <  8:772761‑M2/42‑1


                                       ccagacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACCGCTCCCAATGGAACGAc                                                             <  19:772761‑M2/42‑1


                                        aaTGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGAcc                                                            <  16:231181/101‑1


                                        aaTGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGAcc                                                            <  5:231181/101‑1


                                         agacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCa                                                           <  11:514388‑M2/44‑1


                                          gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  6:204675‑M2/45‑1


                                          gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          <  17:204675‑M2/45‑1


                                          gacaacgactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCAt                                                          >  20:571748‑M2/57‑101


                                             aacgaattaaagggggcgtggagagcaggagatgttgggatcccaaatctaggGGCAACATTAAGATATAATATTACTGCTCCCAATGGAAAGACCAtttt                                                       <  11:1094873‑M2/48‑1


                                                gactcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTcc                                                    <  12:865980‑M2/51‑1


                                                   tcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCAcc                                                 <  2:368931‑M2/54‑1


                                                   tcaaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCAcc                                                 <  13:368931‑M2/54‑1


                                                     aaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTa                                               >  3:352392‑M2/46‑101


                                                     aaatggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTa                                               >  14:352392‑M2/46‑101


                                                       atggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTaaa                                             >  22:434601‑M2/44‑101


                                                       atggagcgtggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTaaa                                             <  21:153671‑M2/58‑1


                                                               tggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTg                                     <  14:143243‑M2/66‑1


                                                               tggagagcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTg                                     <  3:143243‑M2/66‑1


                                                                ggagagcaggagatgttaggagcccaaacctaagGGCAACATTAGGATATAAGATTACTGCGCCCAATGGAAATGCCATTTTTCCATCTAAAAATGGGTgg                                    <  2:760950‑M2/67‑1


                                                                ggagagcaggagatgttaggagcccaaacctaagGGCAACATTAGGATATAAGATTACTGCGCCCAATGGAAATGCCATTTTTCCATCTAAAAATGGGTgg                                    <  13:760950‑M2/67‑1


                                                                     gcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               >  5:335460‑M2/30‑101


                                                                     gcaggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATg                               >  16:335460‑M2/30‑101


                                                                        ggagatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTc                            >  10:381058‑M2/27‑101


                                                                           gatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTaa                         >  15:721622‑M2/24‑101


                                                                           gatgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTaa                         >  4:721622‑M2/24‑101


                                                                            atgttaggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTaaa                        >  20:1080045‑M2/23‑101


                                                                                 aggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATAc                   >  1:170154‑M2/18‑101


                                                                                 aggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATAc                   <  17:443321‑M2/84‑1


                                                                                 aggagcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATAc                   <  6:443321‑M2/84‑1


                                                                                 aCTAGAGAGTCTCTGAGTGCAACATTTAGAATTAATATTACCGCTCCCAAGGTAAAGGCCTATTTCCCCCCTAAAAATGGGTGGAGATGGTCTAAAGATAc                   <  20:393864/101‑1


                                                                                    agcccaaacataacGGCAACATTACGATATAATATTACTGCTCCCAATGAAAAGACCATTTTGCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAAt                <  22:729633‑M2/87‑1


                                                                                     gcccaaacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAAtt               <  10:116310‑M2/88‑1


                                                                                          aacctaagGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGa          >  9:1097442‑M2/9‑101


                                                                                                agGGTAACATTAAGATATAATATTACTGCTCCCAATGGAAAGACAATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    <  22:1161971‑M2/99‑1


                                                                                                agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    <  13:224925‑M2/99‑1


                                                                                                agGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAAt    <  2:224925‑M2/99‑1


TTTGGAAAAACTGTGAACGTGCCCTTAACAGCAGTCTTCAAATGGTTGTATTGGCCTTCCTGAAGATAGTTCTTAAAAGATACTAGACAGGTTCTAAGGGCAACATTACGATATAATATTACTGCTCCCAATGGAAAGACCATTTTTCCACCTAAAAATGGGTGGAGATGGTCTAAAGATACAATTAATGAAAAAATCA  >  NC_013198/1038808‑1039006

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 30 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG