New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	1058951 =	80 (0.836)	17 (0.178)	7/292	6.8	coding (53/183 nt)	LGG_01046	hypothetical protein
	?	NC_013198	1872897 =	76 (0.773)				intergenic (‑27/+113)	LGG_01842/LGG_01843	5‑methylcytosine‑specific restriction enzyme MRR/hypothetical protein
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGGTGA....................................................................................................................................................  .  NC_013198/1059104‑1058951 ......................................................................................................................................................GTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAG  .  NC_013198/1872897‑1873044                                                                                                                                                                                                                                                                                                                AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGG                                                                                                                                                         <  2:96276/151‑1 AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGG                                                                                                                                                         <  1:277417/151‑1 AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGG                                                                                                                                                         <  2:366764/151‑1 AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGG                                                                                                                                                         <  1:701712/151‑1 AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCATTATGG                                                                                                                                                         <  2:858794/151‑1  GACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGGT                                                                                                                                                        <  2:735155/151‑1    CTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGGTGA                                                                                                                                                      >  1:1025624/1‑151    CTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGGTGA                                                                                                                                                      >  1:1077659/1‑151                                                                                    GGCCTGGGCTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGT                                                                      >  1:100279/1‑151                                                                                    GGCCTGGGCTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGT                                                                      >  1:174867/1‑151                                                                                         GGGCTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGCTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGCGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTt                                                                 >  1:454672/1‑150                                                                                          ggcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTAT                                                                >  1:33067/4‑151                                                                                          ggcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTAT                                                                >  2:14631/4‑151                                                                                          ggcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTAT                                                                >  2:1064425/4‑151                                                                                           gcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATG                                                               <  2:1011343/149‑1                                                                                           gcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATG                                                               <  2:1057440/149‑1                                                                                           gcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATG                                                               <  2:236559/149‑1                                                                                           gcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATG                                                               <  1:864929/149‑1                                                                                           gcTTGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATG                                                               <  1:432908/149‑1                                                                                              TGGCCATTGCGACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGC                                                            <  1:980215/151‑1                                                                                                         ACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGG                                                 >  1:987571/1‑151                                                                                                         ACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGG                                                 >  2:660531/1‑151                                                                                                         ACCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGG                                                 <  2:913691/151‑1                                                                                                          CCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGC                                                <  2:823258/151‑1                                                                                                          CCAAGGTCCTTACACTCCGATCCCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAACCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGC                                                <  1:856633/151‑1                                                                                                                                                        TGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAG  <  1:921284/151‑1                                                                                                                                                        TGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAG  <  1:42368/151‑1                                                                                                                                                                                                                                                                                                                AGACTTCTGCGCCGGTGAACGCGTTATGGTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGGCCTGGGTTTGGCCATTGCGACCAAGGTCCTTACACGCAGATCCCTGCGCCGGTGAACGCGTTATGGTGA....................................................................................................................................................  .  NC_013198/1059104‑1058951 ......................................................................................................................................................GTGAGCGTGAGCCAGCCCGGTTAGAAACCGGAGCATAAGTGGCCTTGGGCGTGATGACCGGGCTTTGGTCATTGCGCCCAAGGTCCTTATGTGCAGGTTTCTGGGCTGGCGAACGCGTTATGAGCGTGAACCGGCGCGCTTAGGGATCGGAG  .  NC_013198/1872897‑1873044 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG