New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1445926 =111 (1.185)5 (0.053) 3/286 9.0 coding (185/204 nt) LGG_01442 hypothetical protein
?NC_013198 1446024 = 94 (0.956)coding (87/204 nt) LGG_01442 hypothetical protein
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

GGCCACTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGCCGG.....................................................................................................................................................  .  NC_013198/1446082‑1445926
......................................................................................................................................................GCGCCGGGGAGCGCGTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAACATCA  .  NC_013198/1446024‑1446169
                                                                                                                                                                                                                                                                                                                  
GGCCACTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCG                                                                                                                                                             <  2:1064813/151‑1
   CACTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCCTAACCCCCCCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGC                                                                                                                                                          >  2:95157/1‑151
   CACTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCCCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGCCTTCTAACCGCGC                                                                                                                                                          >  2:243019/1‑151
     CTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCCCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGCCG                                                                                                                                                        >  2:1012375/1‑151
                  TTCTAACCGCGCCGNNNCGCGCTC..ACCATAACGCNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCAAAGCCCAGCCATCACGTTTTAGGCCGCTTACACTCCGACTTCTGACCGCGCCGGGGAGCGCGTTATGG                                                                                                                                         <  1:445884/151‑1
                    CTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGCCGGGGAGCGCGTTATGG                                                                                                                                         <  2:753907/151‑1
                      AACCGCGCTGGCTCGCGCTCTCACCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGCCGGGGAGCGCGTTATGGTG                                                                                                                                       <  1:609807/151‑1
                                                                                                                               CGCTTACACTCCGACTTCTAACCGCGCCGGGGAGCGCGTTAAAGAAAGTAAGCGTGGATCCGGCGCGGTTAGAAGTCGGAGTGTAAGCGGCCTTGGGCGTGATGGCCCGGTTTTGGCCATTGCGACTGAGGTCCTTACACGCAGACTTCTG                              >  1:923215/1‑151
                                                                                                                                                    CCGCGCGGGGGAGCGCTTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAAC      <  1:1001232/151‑1
                                                                                                                                                      GCGCCGGGGAGCGCGTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAACAT    >  1:7614/1‑151
                                                                                                                                                      GCGCCGGGGAGCGCGTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAACAT    >  2:451561/1‑151
                                                                                                                                                        GCCGGGGAGCGCGTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAACATCA  >  1:185783/1‑151
                                                                                                                                                                                                                                                                                                                  
GGCCACTTACACTCCGACTTCTAACCGCGCTGGCTCGCGCTCTCACCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTTGGTCGCAATGGCCAAAACCGGGCCATCACGCCCAAGGCCGCTTACACTCCGACTTCTAACCGCGCCGG.....................................................................................................................................................  .  NC_013198/1446082‑1445926
......................................................................................................................................................GCGCCGGGGAGCGCGTTATGGTGAG..AGCGCG.AGCCAGCGCGGTTAGAAGTCGGAGTGTAAGTGGCCTTAAGCGTGATGGCCGGGCTTTGGCCATTGCGACCAAGGTCCTTATACGCAGGCTTCTGCGTCGGGGGAGCGCGTCCTAAAACATCA  .  NC_013198/1446024‑1446169

Base quality scores:  ATCG  < 3 ≤  ATCG  < 11 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG