New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1873857 =0 (0.000)8 (0.084) 5/290 7.8 intergenic (‑53/‑48) LGG_01843/LGG_01844 hypothetical protein/hypothetical protein
?NC_013198 = 1873978 75 (0.763)coding (74/177 nt) LGG_01844 hypothetical protein
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

CGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGATTTCTAAGCGCGTCGGTTCACG...........  .  NC_013198/1874006‑1873857
.................................................................................................................................................TCACGCTCACCATAAC  .  NC_013198/1873978‑1873968
                                                                                                                                                                 
CGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGC            <  1:941149/151‑1
    CCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCAC        >  1:747918/1‑151
    CCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCAC        >  2:730790/1‑151
      CCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCA      <  1:590417/151‑1
       CGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCAT     <  2:731624/151‑1
         GCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAA   >  1:466337/1‑151
         GCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAA   >  2:974231/1‑151
          CGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAAC  <  1:663119/151‑1
                                                                                                                                                                 
CGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGATTTCTAAGCGCGTCGGTTCACG...........  .  NC_013198/1874006‑1873857
.................................................................................................................................................TCACGCTCACCATAAC  .  NC_013198/1873978‑1873968

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG