| New junction evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | annotation | gene | product | ||
| * | ? | NC_013198 | = 2627475 | 99 (1.160) | 11 (0.129) | 6/288 | 4.0 | intergenic (‑6/+518) | glmU/LGG_02563 | UDP‑N‑acetylglucosamine pyrophosphorylase/ N‑acetylglucosamine‑1‑phosphate uridyltransferase/glycopeptide antibiotics resistance protein |
| ? | NC_013198 | = 2627667 | 77 (0.866) | intergenic (‑198/+326) | glmU/LGG_02563 | UDP‑N‑acetylglucosamine pyrophosphorylase/ N‑acetylglucosamine‑1‑phosphate uridyltransferase/glycopeptide antibiotics resistance protein | ||||
| Continuation Left: 0 Continuation Right:0 | ||||||||||
| Rejected: Position hash score below cutoff. | ||||||||||
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT................................................................................................................................................................... . NC_013198/2627322‑2627475
....................................................................................................................................................ATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCCATCACGTTTTAGGCCGCTTACACTCCGACTTCTAACCGCGCCGGCTCGCGCTCAGTTGTTGTCAGTATC . NC_013198/2627667‑2627519
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATG > 1:540912/1‑151
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATG > 2:371353/1‑151
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATG > 1:749892/1‑151
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATG > 2:277972/1‑151
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATG > 2:148057/1‑151
TAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT < 2:981128/151‑1
TAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT < 2:749710/151‑1
tgCCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACC < 2:1160552/149‑1
ACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCT < 2:382475/151‑1
ACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCT < 1:446462/151‑1
TTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGG < 1:10359/151‑1
TAATTCGTCGATTTCATCCGCGTCCCTTTACCGTCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCC < 2:1034183/151‑1
TAATCCTGCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCNNAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCC < 2:1256547/151‑1
TAATACTTCGATTTCATCCGCGTCCCCTTCCCGGCCGGGGGAAGGATGGTGAATTGCTGGGACAAAGGAAT..............GAGCGGTTACGCCCATAACGCGCTCCCCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCC < 1:416459/151‑1
TAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCC < 1:656265/151‑1
AATGCTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAATACTCCATTCCTAATTCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGG < 1:371344/151‑1
TTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCCATCACG < 2:430920/151‑1
CGAGAATGATGGTGAATTTCTTTGACATATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCCATCACGTTTTAGGCCGCTTACACTCCGACTTCTAACC < 2:707941/151‑1
AT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCCATCACGTTTTAGGCCGCTTACACTCCGACTTCTAACCGCGCCGGCTCGCGCTCAGTTGTTGTCAGTATC > 2:156553/1‑151
CGATAGCGTCAGGATGAATGGCTTCCACCTGGCTCACCACATGCTCGACCATGCTCTTACCACAGACCGGTTGCAAAACCTTATAATACTTCGATTTCATCCGCGTCCCCTTACCGGCCGCGAGAATGATGGTGAATTTCTTTGACATATGAAT................................................................................................................................................................... . NC_013198/2627322‑2627475
....................................................................................................................................................ATGAAT..............TCTCTCTTACGCCCATAACGCGCTCACCGGCGCAGAAGTCTGCGTGTAAGGACCTAAAACGCAATGGCCAAGAGCGGGCCATCACGTTTTAGGCCGCTTACACTCCGACTTCTAACCGCGCCGGCTCGCGCTCAGTTGTTGTCAGTATC . NC_013198/2627667‑2627519
Base quality scores:
ATCG
< 3 ≤
ATCG
< 9 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|