New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 807226 =73 (0.892)20 (0.244) 7/276 3.5 coding (19/153 nt) LGG_00795 hypothetical protein
?NC_013198 = 807588 73 (0.821)intergenic (+228/‑81) LGG_00795/yfnB hypothetical protein/haloacid dehalogenase‑like family hydrolase
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

TAGAAATCGGAGTGTAAGTGGCCTCAGA.CGTGATGGCCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA..........................................................................................................................  .  NC_013198/807333‑807226
..........................................................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGGCC.TGGGACGTGATGGCCGGGTTTTGGCCATTGCGTTCCAGG.TCCTTACACGCAGACTCCTGCGCCGGTGAACGCGTTTCAGA  .  NC_013198/807588‑807481
                                                                                                              ||||||||||||                                                                                                              
TAGAAATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCc                                                                                   <  1:61744/151‑2
   AAATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctgg                                                                                >  2:1240514/1‑147
     ATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggac                                                                              <  2:834250/151‑7
     ATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggac                                                                              <  1:357440/151‑7
     ATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggac                                                                              <  1:984180/151‑7
         GAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaa                                                                          >  1:1094301/1‑141
         GAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaa                                                                          >  2:121004/1‑141
         GAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaa                                                                          >  2:1036424/1‑141
           GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggatcaaaat                                                                        <  1:428269/151‑13
           GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaaat                                                                        >  2:353700/1‑139
           GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaaat                                                                        <  1:664217/151‑13
                                    GCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTttgatcc                                               <  1:417499/151‑8
                                               gccattttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTAC                                    <  1:392947/136‑1
                                               gccattttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTAC                                    <  2:220507/136‑1
                                               gccattttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTAC                                    <  2:594198/136‑1
                                                       gatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTACAtggagat                            >  1:330527/8‑144
                                                             gGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTACATGGAGATTTCTGC                      >  1:1033079/2‑151
                                                               GTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTACATGGAGATTTCTGCGa                    >  1:141131/1‑150
                                                                 CCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTACATGGAGATTTCTGCGact                  >  1:332243/1‑148
                                                                                 CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCAGGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg  >  2:143023/1‑147
                                                                                                              ||||||||||||                                                                                                              
TAGAAATCGGAGTGTAAGTGGCCTCAGA.CGTGATGGCCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA..........................................................................................................................  .  NC_013198/807333‑807226
..........................................................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGGCC.TGGGACGTGATGGCCGGGTTTTGGCCATTGCGTTCCAGG.TCCTTACACGCAGACTCCTGCGCCGGTGAACGCGTTTCAGA  .  NC_013198/807588‑807481

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG