New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1873857 =0 (0.000)12 (0.155) 6/290 5.2 intergenic (‑53/‑48) LGG_01843/LGG_01844 hypothetical protein/hypothetical protein
?NC_013198 = 1873978 58 (0.724)coding (74/177 nt) LGG_01844 hypothetical protein
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

GCGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGATTTCTAAGCGCGTCGGTTCACG..............  .  NC_013198/1874007‑1873857
..................................................................................................................................................TCACGCTCACCATAACGCG  .  NC_013198/1873978‑1873965
                                                                                                                                                                     
GCGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACG                >  2:330169/1‑151
 CGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGC               <  1:112081/151‑1
 CGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGC               <  1:164935/151‑1
     CCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCAC           >  1:4702/1‑151
     CCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCAC           <  2:78396/151‑1
      CCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACC          <  1:597598/151‑1
          GCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAA      >  1:812439/1‑151
          GCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAA      >  2:756376/1‑151
             CAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAACGC   <  1:177291/151‑1
             CAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAACGC   <  1:372872/151‑1
             CAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAACGC   <  1:677923/151‑1
             CAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAACGC   <  1:7887/151‑1
              AGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGGTTTCTAACCGGGCTGGTTCACGCTCACCATAACGCG  <  2:747858/151‑1
                                                                                                                                                                     
GCGCTCCCCGGCGCAGAAGTCGGATCACGCTCACCATAACGCGTTCGCCAGCCCAGAAACCTGCACATAAGGACCTTGGGCGCAATGACCAAAGCCCGGTCATCACGCCCAAGGCCACTTATGCTCCGATTTCTAAGCGCGTCGGTTCACG..............  .  NC_013198/1874007‑1873857
..................................................................................................................................................TCACGCTCACCATAACGCG  .  NC_013198/1873978‑1873965

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG