Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_013198	1,877,374	C→G	intergenic (‑403/‑48)	LGG_01847/LGG_01848	membrane protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_013198	1,877,374	0	C→G	100.0%	18.6	4	intergenic (‑403/‑48)	LGG_01847/LGG_01848	membrane protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (2/2):  ref base (0/0):  total (2/2)

TTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAA.AGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAGGAATTCGCTCTTGTCACCTATAGTACAACAAAT  >  NC_013198/1877281‑1877444                                                                                               |                                                                       ttCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAA.AGGGAGCGAATCCCTTCGTGCTAGAATGTTa                                                                 >  12:291985/1‑101 ttCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAA.AGGGAGCGAATCCCTTCGTGCTAGAATGTTa                                                                 >  1:291985/1‑101      aGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAA.AGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGc                                                            <  11:966870/101‑1      aGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAA.AGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGc                                                            <  22:966870/101‑1                                                        tCTGAGAAGAAAGAA.GTGGAGCGAACACCTTCTTGCTAGAATGTTAATTTCAAGAAAAACACGATAGCAGTAGGGGGAATTCGCTCTTGTCACCTATAGTa          <  14:1198597/101‑1                                                        tCTGAGAAGAAAGAA.GTGGAGCGAACACCTTCTTGCTAGAATGTTAATTTCAAGAAAAACACGATAGCAGTAGGGGGAATTCGCTCTTGTCACCTATAGTa          <  3:1198597/101‑1                                                                 aCAGAAGAAGGAGCGAATCCGTTCGTGTTAGATTGTTATTTGCAAGAAAAACGCCAGAGCAGTAGGATGAATTCTCTCTTGTCACCTATAGTACAACAAAt  <  17:1094483/101‑1                                                                 aCAGAAGAAGGAGCGAATCCGTTCGTGTTAGATTGTTATTTGCAAGAAAAACGCCAGAGCAGTAGGATGAATTCTCTCTTGTCACCTATAGTACAACAAAt  <  6:1094483/101‑1                                                                                               |                                                                       TTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAA.AGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAGGAATTCGCTCTTGTCACCTATAGTACAACAAAT  >  NC_013198/1877281‑1877444 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 28 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG