New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	NC_013198	807226 =	112 (1.239)	31 (0.343)	10/276	5.3	coding (19/153 nt)	LGG_00795	hypothetical protein
	?	NC_013198	= 807588	99 (1.007)				intergenic (+228/‑81)	LGG_00795/yfnB	hypothetical protein/haloacid dehalogenase‑like family hydrolase
Continuation Left: 0 Continuation Right:0
Rejected: Position hash score below cutoff.

GAAATCGGAGTGTAAGTGGCCTCAGA.CGTGATGGCCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA.............................................................................................................................  .  NC_013198/807331‑807226 ........................................................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGGCC.TGGGACGTGATGGCCGGGTTTTGGCCATTGCGTTCCA.GG.TCCTTACACGCAGACTCCTGCGCCGGTGAACGCGTTTCAGACC  .  NC_013198/807588‑807479                                                                                                             ||||||||||||                                                                                                                  GAAATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctg                                                                                    >  1:311300/1‑148 GAAATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctg                                                                                    >  1:346426/1‑148    ATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggac                                                                                 <  2:389613/151‑7    ATCGGAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggac                                                                                 <  2:32477/151‑7        GAGTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaa                                                                             >  2:1036858/1‑141          GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggatcaaaat                                                                           <  1:929435/151‑13          GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaaat                                                                           >  1:100774/1‑139          GTGTAAGTGGCCCTGGACCGAAATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCctggaccgaaat                                                                           >  1:279162/1‑139                        ggaccgaaATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGC                                                             >  2:158553/9‑151                         gaccgaaATGGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCC                                                            <  2:152384/144‑1                                  GGCCGGGCTTTGGCCATTTTGATCCAGGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTttgatc                                                   >  2:639286/1‑145                                                 attttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACAtg                                   >  2:419251/13‑149                                                  ttttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACAtgg                                  >  1:190387/12‑148                                                  ttttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACAtgg                                  <  1:121596/140‑4                                                    ttgatccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACAtggag                                <  2:258064/142‑6                                                        tccagGGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACAtggagattt                            >  1:766079/6‑142                                                             GGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCG                       >  1:628159/1‑151                                                             GGTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAACGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGATTTTGGCCATATTGATCCAGGG.TCCTTACATGGAGATTTCTGCG                       >  2:212228/1‑151                                                              GTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGa                      >  1:215755/1‑150                                                              GTCCTTACACGGAGATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGa                      >  1:1001679/1‑150                                                                           GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTT         >  1:984291/1‑151                                                                           GATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTT         >  2:339336/1‑151                                                                            ATTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTT        >  1:306186/1‑151                                                                             TTTCTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTa       >  2:421152/1‑150                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  2:157238/151‑5                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  2:190399/151‑5                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  1:96415/151‑5                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  1:77325/151‑5                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  2:340844/151‑5                                                                                CTGCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGAAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaagg    <  2:407203/151‑5                                                                                  GCGACTGTGAGCGCGTTTAAGGAGAGAGCGTGAACAGGAGCGCATAGAAATCGGAATGTAAGTGGCCCTGGACCGTAATGGCCGGTTTTTGGCCATTTTGATCCA.GGGTCCTTACATGGAGATTTCTGCGACTGTGAGCGCGTTTaaggag  <  1:356762/151‑7                                                                                                             ||||||||||||                                                                                                                  GAAATCGGAGTGTAAGTGGCCTCAGA.CGTGATGGCCGGGCTTTGTCCATTGCG.TCTGAGGTCCTTACACGTAGATTTCTGCGACTGTGAACGCGTTTTAGAGCAGA.............................................................................................................................  .  NC_013198/807331‑807226 ........................................................................................................................GCGCTTAGGAGTCGGAGTGTAAGCGGCC.TGGGACGTGATGGCCGGGTTTTGGCCATTGCGTTCCA.GG.TCCTTACACGCAGACTCCTGCGCCGGTGAACGCGTTTCAGACC  .  NC_013198/807588‑807479 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG