| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_013198 | 1,877,343 | 2 bp→AA | intergenic (‑372/‑78) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_013198 | 1,877,343 | 0 | T→A | 100.0% | 17.2 | 4 | intergenic (‑372/‑79) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/3): ref base (0/0): total (1/3) | ||||||||||
| * | NC_013198 | 1,877,344 | 0 | G→A | 100.0% | 16.9 | 4 | intergenic (‑373/‑78) | LGG_01847/LGG_01848 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (1/3): ref base (0/0): total (1/3) | ||||||||||
GACCTTAAGCGTAATGGCCCAAGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAG . NC_013198/1877222‑1877411
||
gACCTTAAGCGTAATGGCCCAAGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCt < 1:73418/151‑1
aGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGaaaa > 1:778707/1‑151
tAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGAAAAACACGATAGCAGTagga < 1:225470/151‑1
aaGGCCACTTACTCTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCAAACAAAAAGGGAGCGAATCCCTTCGTGCTAGAATGTTAATTGCAAGAAAAACACGATAGCAGTaggag < 1:264670/151‑1
||
GACCTTAAGCGTAATGGCCCAAGCCCGGCCATTACGCTTAAGGCCACTTACACTCCGGTTTCTAAGCGCGCCGGTTCGCGCTTAGTACATGGCGTAAAGTTTAAGTGGGTGATATCTGAGCTGACAGAAAGGGAGCGAATCCCTTCGTGCTACAATGTTAATTGCAAGAAAAACACGATAGCAGTAGGAG . NC_013198/1877222‑1877411
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|