New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =334 (0.556)1138 (1.894) 109/192 0.6 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998907 NA (NA)intergenic (+500/‑177) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0

Only 100 of 1350 total aligned reads displayed.

TAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.................................................................................................................  <  NC_013198/1998873‑1998770
....................................................................................................CATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTA  <  NC_013198/1998907‑1998808
                                                                                                                                                                                                                         
   TCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAACTATGCTTGACATTACCAGCGGCTGGCATT                                                                                                                   >  28:1006660/1‑101
   TCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT                                                                                                                   <  7:366644/101‑1
    CAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......A                                                                                                            >  9:197337/1‑101
         ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATT                                                                                                       >  22:526124/1‑101
         ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATT                                                                                                       >  24:397088/1‑101
           AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTAT                                                                                                     >  25:494766/1‑101
             GGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAG                                                                                                   >  5:911377/1‑101
              GAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGT                                                                                                  >  9:689764/1‑101
                 AACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGT                                                                                               >  13:765881/1‑101
                       CAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACAT                                                                                         >  10:876325/1‑101
                        AAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATT                                                                                        >  21:31228/1‑101
                         AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTA                                                                                       >  11:23726/1‑101
                         AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTA                                                                                       >  18:256382/1‑101
                         AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTA                                                                                       >  3:256382/1‑101
                         AATAAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTt                                                                                       >  7:1188054/1‑100
                          ATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTAT                                                                                      >  5:531316/1‑101
                          ATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTAT                                                                                      >  16:559423/1‑101
                          ATGAATAAATACATCGAGTCTGCACTTGATAAAAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGACATT......ACAAGTGTAGAGGTTTACATTAc                                                                                      >  2:1142742/1‑100
                           TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATA                                                                                     >  4:857025/1‑101
                           TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATA                                                                                     >  19:857025/1‑101
                           TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATA                                                                                     >  22:33508/1‑101
                           TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATA                                                                                     >  1:835978/1‑101
                           TGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATA                                                                                     >  13:1099610/1‑101
                            aAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAG                                                                                    >  22:1128399/2‑101
                            GAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAG                                                                                    >  29:792659/1‑101
                            GAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAG                                                                                    >  21:1165860/1‑101
                             AATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGT                                                                                   >  23:1237758/1‑101
                             AATAAATACATCGTCTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATAATAGT                                                                                   >  16:1135888/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGT                                                                                >  28:336553/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGT                                                                                <  13:532618/101‑1
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCAGT......ACAATTATAGAGGTTAACATTATAGTTGT                                                                                >  20:877161/1‑101
                                AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTAACAGAGGCTGGCCTT......AAAATTATAGAGGTTAACACTATAGTTGT                                                                                >  8:424273/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTG                                                                               >  19:168344/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTG                                                                               >  4:168344/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAACTATAATCGTTAACATTGTAGTTGTG                                                                               >  4:59166/1‑101
                                 AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAACTATAATCGTTAACATTGTAGTTGTG                                                                               >  19:59166/1‑101
                                  ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGT                                                                              >  14:340656/1‑101
                                   TACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTC                                                                             >  27:207971/1‑101
                                   TACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTC                                                                             >  6:1214591/1‑101
                                   TACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTC                                                                             >  9:423307/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTACCATTATAGTTGTGTCG                                                                            >  2:992591/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCG                                                                            >  25:868494/1‑101
                                    ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCG                                                                            >  1:1237469/1‑101
                                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTT                                                                          >  18:1160474/1‑101
                                      ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTT                                                                          >  3:1160474/1‑101
                                         GTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGT                                                                       >  24:957921/1‑101
                                          TGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTC                                                                      >  17:888290/1‑101
                                            TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAG                                                                    >  10:626391/1‑101
                                            TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACACTACCAGCCGTTGGCATC......ACCATTTTGGGAGTTACAATTCTAGTTGTGTCGTTAGTCAG                                                                    >  29:1078795/1‑101
                                               GCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCA                                                                 >  26:1184763/1‑101
                                               GCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCA                                                                 >  29:536608/1‑101
                                                 ACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......A                                                        >  24:682948/1‑101
                                                     GCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGA                                                    >  22:815767/1‑101
                                                     GCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGA                                                    >  16:257802/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAG                                                   >  29:327599/1‑101
                                                      CTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCAGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAG                                                   <  16:755306/101‑1
                                                         ACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAAC                                                >  26:827041/1‑101
                                                         ACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAAC                                                >  1:614087/1‑101
                                                         ACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAAC                                                >  7:952175/1‑101
                                                         ACAGCATT..CGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAG                                              >  3:52938/1‑101
                                                         ACAGCATT..CGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAG                                              >  18:52938/1‑101
                                                          CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACA                                               >  12:227918/1‑101
                                                           AGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAG                                              >  27:634492/1‑101
                                                           AGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAG                                              >  17:627288/1‑101
                                                            GCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGC                                             >  1:383357/1‑101
                                                            GCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGC                                             >  11:862059/1‑101
                                                             CATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGT...............TGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACA                             >  9:1075801/1‑101
                                                              ATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCA                                           >  10:1042805/1‑101
                                                                 ATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAAT                                        >  2:762670/1‑101
                                                                        AAATATGCTTGACATTACCAGCGGCTGGCATTGGCATTACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATa                                       >  12:704726/1‑100
                                                                         AATATGCTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAAT                                >  8:134593/1‑101
                                                                               CTTGACATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCG                          >  20:465498/1‑101
                                                                                    CATTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCT                     >  2:498847/1‑101
                                                                                      TTACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGC                   >  20:175873/1‑101
                                                                                        ACCAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCAC                 >  25:1236313/1‑101
                                                                                          CAGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTT               >  24:105247/1‑101
                                                                                           AGCGGCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTc              >  14:575634/1‑100
                                                                                               GCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAA          >  6:919104/1‑101
                                                                                               GCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAA          >  21:860336/1‑101
                                                                                               GCTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAA          >  23:413309/1‑101
                                                                                                CTGGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAAC         >  28:735727/1‑101
                                                                                                  GGCATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAG       >  17:1385/1‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATCAACCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCT            >  17:1020749/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  14:820298/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  14:1189503/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  7:624352/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  11:426453/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  18:980987/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  6:575085/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  6:360094/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  5:193999/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  21:529028/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  3:980987/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  2:229860/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  26:399970/2‑101
                                                                                                    aATT......ACAATTATAGTGGTTAACATTATAGTTCTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  24:164195/2‑101
                                                                                                    CATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  17:374505/1‑101
                                                                                                    CATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA     >  8:74384/1‑101
                                                                                                     ATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCAT    >  23:697638/1‑101
                                                                                                     ATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCAT    >  10:172064/1‑101
                                                                                                                                                                                                                         
TAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT.................................................................................................................  <  NC_013198/1998873‑1998770
....................................................................................................CATT......ACAATTATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCAT.......AAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTA  <  NC_013198/1998907‑1998808

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG