New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? NC_013198 1998770 =450 (0.788)102 (0.179) 32/194 4.6 intergenic (+363/‑314) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
?NC_013198 = 1998901 1212 (2.058)intergenic (+494/‑183) lciIC/LGG_01955 XRE family transcriptional regulator/reverse transcriptase‑like protein
Continuation Left: 0  Continuation Right: 0
Rejected: Position hash score below cutoff.

Only 100 of 230 total aligned reads displayed.

GCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......................................................................................................  <  NC_013198/1998867‑1998770
...............................................................................................ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  NC_013198/1998901‑1998802
                                                                                                                                                                                                        
   ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTG                                                                                                >  11:894976/1‑101
   ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTG                                                                                                >  7:312884/1‑101
   ATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTG                                                                                                >  18:312884/1‑101
           AACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACAT                                                                                        >  20:1026426/1‑101
           AACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACAT                                                                                        >  9:1026426/1‑101
                  AAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTT                                                                                 >  19:481873/1‑101
                  AAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTT                                                                                 >  8:481873/1‑101
                   AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTG                                                                                >  17:321156/1‑101
                   AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTG                                                                                >  13:230393/1‑101
                   AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTG                                                                                >  2:230393/1‑101
                   AATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTG                                                                                >  6:321156/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  12:422546/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  18:513149/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  7:513149/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  19:1116017/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  8:1116017/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  1:841900/1‑101
                          AAATACATCGTGTCTGCACTTGCTAACAGCATTATCAAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTT                                                                         >  22:966191/1‑101
                           AATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTA                                                                        >  12:1044371/1‑101
                            ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAG                                                                       >  3:1095093/1‑101
                            ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAG                                                                       >  14:1095093/1‑101
                            ATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAG                                                                       >  12:772313/1‑101
                              ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTC                                                                     >  18:827257/1‑101
                              ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTC                                                                     >  7:827257/1‑101
                              ACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCAT.....AGTGGTTAACATTATAGTTGTGTCGTTAGTCAGC                                                                  >  22:604467/1‑101
                                ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAG                                                                   >  8:925874/1‑101
                                ATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAG                                                                   >  19:925874/1‑101
                                      TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATA                                                              >  6:895334/1‑101
                                      TCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATA                                                              >  17:895334/1‑101
                                       CTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAG                                                            >  12:604579/1‑101
                                           ACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGA                                                        >  10:854537/1‑101
                                           ACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGA                                                        >  21:854537/1‑101
                                            CTTGCTAACAGCATCATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAA                                                       >  20:269827/1‑101
                                                  AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  15:833419/1‑101
                                                  AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  16:1209519/1‑101
                                                  AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  4:833419/1‑101
                                                  AACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCA                                                 >  5:1209519/1‑101
                                                    CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAA                                                >  18:1086/1‑101
                                                    CAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATTT.ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAA                                                >  7:1086/1‑101
                                                                  AAATATGCTTGACATTACCAGCGGCTGGCATTTTATAGTGGTTAACCTTATAGTTGTGTCGTTAGTCAGCCATAACAAGAACAGCCAAATGAAAAAATACA                                   >  2:948449/1‑101
                                                                  AAATATGCTTGACATTACCAGCGGCTGGCATTTTATAGTGGTTAACCTTATAGTTGTGTCGTTAGTCAGCCATAACAAGAACAGCCAAATGAAAAAATACA                                   >  13:948449/1‑101
                                                                    ATATGCTTGACATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGT                               >  1:232071/1‑101
                                                                               ATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTG                    >  3:1191576/1‑101
                                                                               ATTACCAGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTG                    >  14:1191576/1‑101
                                                                                     AGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA              >  18:1000473/1‑101
                                                                                     AGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA              >  1:933686/1‑101
                                                                                     AGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA              >  12:933686/1‑101
                                                                                     AGCGGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACA              >  7:1000473/1‑101
                                                                                        GGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA           >  8:246848/1‑101
                                                                                        GGCTGGCATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCA           >  19:246848/1‑101
                                                                                               ATT..ATAGTGGTTAGCATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  18:1244460/1‑101
                                                                                               ATT..ATAGTGGTTAGCATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  7:1244460/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  21:758332/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  6:1038136/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  4:1128809/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  4:156380/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  4:351136/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  5:157907/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  20:162091/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  10:160221/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  9:525749/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  9:248587/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  10:793840/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  8:348877/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  15:1128809/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  15:156380/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  15:351136/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  16:157907/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  17:1038136/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  19:348877/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  1:480476/1‑101
                                                                                               ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  1:625319/1‑101
                                                                                               ATT..ATAGTGGTAAACATTATAGTTGTGTCGTTAGTCAGCCATCTGGAGACCAGCCAAATGCATAAATACATCGTGTCTGCACTTGATAACAGCATTCTCGA    >  6:1193958/1‑101
                                                                                               ATT..ATAGTGGTAAACATTATAGTTGTGTCGTTAGTCAGCCATCTGGAGACCAGCCAAATGCATAAATACATCGTGTCTGCACTTGATAACAGCATTCTCGA    >  17:1193958/1‑101
                                                                                               ATT..ATAGTGGGTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACGGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  3:857458/1‑101
                                                                                               ATT..ATAGTGGGTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACGGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGA    >  14:857458/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  6:491048/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  9:823505/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  10:602072/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  10:749506/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  14:503223/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  21:749506/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  21:602072/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  21:154360/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  20:854563/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  20:823505/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  17:491048/1‑101
                                                                                                TT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAG   >  3:503223/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCTTGTCTGCACTTGCTAACAGCATTATCGAGC  >  18:665531/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCTTGTCTGCACTTGCTAACAGCATTATCGAGC  >  7:665531/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  19:146823/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  8:146823/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  17:139577/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  22:1107130/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  13:330019/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  12:843007/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  11:1107130/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  2:330019/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  6:139577/1‑101
                                                                                                 T..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  >  10:1059036/1‑101
                                                                                                                                                                                                        
GCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGCAAATATGCTTGACATTACCAGCGGCTGGCATT......................................................................................................  <  NC_013198/1998867‑1998770
...............................................................................................ATT..ATAGTGGTTAACATTATAGTTGTGTCGTTAGTCAGCCATAAGGAGAACAGCCAAATGAATAAATACATCGTGTCTGCACTTGCTAACAGCATTATCGAGC  <  NC_013198/1998901‑1998802

Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG